public class HMMGaussianClassifier extends ObservationClassifier
This actor performs Maximum-Likelihood classification of the partially-observed Bayesian Network models. ClassifyObservations is designed to work with ExpectationMaximization, which provides the Maximum-Likelihood model parameters from which the observations are assumed to be drawn. The output is an integer array of labels, representing the maximum-likelihood hidden state sequence of the given model.
The user provides a set of parameter estimates as inputs to the model, and The mean is a double array input containing the mean estimate and sigma is a double array input containing standard deviation estimate of each mixture component. If the modelType is HMM, then an additional input, transitionMatrix is provided, which is an estimate of the transition matrix governing the Markovian process representing the hidden state evolution. The prior input is an estimate of the prior state distribution.
Entity.ContainedObjectsIterator
Modifier and Type | Field and Description |
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PortParameter |
covariance
Standard deviation parameter array for the Gaussian distribution.
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PortParameter |
mean
Mean parameter array for the Gaussian distribution.
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_classificationLength, _likelihood, _nStates, _observations, _priors, _transitionMatrixEstimate, input, likelihood, output, prior, transitionMatrix
_typesValid
_actorFiringListeners, _initializables, _notifyingActorFiring, _stopRequested
_changeListeners, _changeLock, _changeRequests, _debugging, _debugListeners, _deferChangeRequests, _elementName, _isPersistent, _verbose, _workspace, ATTRIBUTES, CLASSNAME, COMPLETE, CONTENTS, DEEP, FULLNAME, LINKS
COMPLETED, NOT_READY, STOP_ITERATING
Constructor and Description |
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HMMGaussianClassifier(CompositeEntity container,
java.lang.String name)
Construct an actor with the given container and name.
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Modifier and Type | Method and Description |
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java.lang.Object |
clone(Workspace workspace)
Clone the actor into the specified workspace.
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protected double |
emissionProbability(double[] y,
int hiddenState)
Abstract class defining the emission probability computation of the
latent variable.
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void |
fire()
Consume the inputs and produce the outputs of the FFT filter.
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classifyHMM, gaussianClassifyMM
_containedTypeConstraints, _customTypeConstraints, _defaultTypeConstraints, _fireAt, _fireAt, attributeTypeChanged, clone, isBackwardTypeInferenceEnabled, newPort, typeConstraintList, typeConstraints
_actorFiring, _actorFiring, _declareDelayDependency, addActorFiringListener, addInitializable, connectionsChanged, createReceivers, declareDelayDependency, getCausalityInterface, getDirector, getExecutiveDirector, getManager, initialize, inputPortList, isFireFunctional, isStrict, iterate, newReceiver, outputPortList, postfire, prefire, preinitialize, pruneDependencies, recordFiring, removeActorFiringListener, removeDependency, removeInitializable, setContainer, stop, stopFire, terminate, wrapup
_adjustDeferrals, _checkContainer, _getContainedObject, _propagateExistence, getContainer, instantiate, isAtomic, isOpaque, moveDown, moveToFirst, moveToIndex, moveToLast, moveUp, propagateExistence, setName
_addPort, _description, _exportMoMLContents, _removePort, _validateSettables, connectedPortList, connectedPorts, containedObjectsIterator, getAttribute, getPort, getPorts, linkedRelationList, linkedRelations, portList, removeAllPorts, setClassDefinition, uniqueName
_setParent, exportMoML, getChildren, getElementName, getParent, getPrototypeList, isClassDefinition, isWithinClassDefinition
_addAttribute, _adjustOverride, _attachText, _cloneFixAttributeFields, _containedDecorators, _copyChangeRequestList, _debug, _debug, _debug, _debug, _debug, _executeChangeRequests, _getIndentPrefix, _isMoMLSuppressed, _markContentsDerived, _notifyHierarchyListenersAfterChange, _notifyHierarchyListenersBeforeChange, _propagateValue, _removeAttribute, _splitName, _stripNumericSuffix, addChangeListener, addDebugListener, addHierarchyListener, attributeChanged, attributeDeleted, attributeList, attributeList, decorators, deepContains, depthInHierarchy, description, description, event, executeChangeRequests, exportMoML, exportMoML, exportMoML, exportMoML, exportMoMLPlain, getAttribute, getAttributes, getChangeListeners, getClassName, getDecoratorAttribute, getDecoratorAttributes, getDerivedLevel, getDerivedList, getDisplayName, getFullName, getModelErrorHandler, getName, getName, getSource, handleModelError, isDeferringChangeRequests, isOverridden, isPersistent, lazyContainedObjectsIterator, message, notifyOfNameChange, propagateValue, propagateValues, removeAttribute, removeChangeListener, removeDebugListener, removeHierarchyListener, requestChange, setClassName, setDeferringChangeRequests, setDerivedLevel, setDisplayName, setModelErrorHandler, setPersistent, setSource, sortContainedObjects, toplevel, toString, validateSettables, workspace
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
createReceivers, getCausalityInterface, getDirector, getExecutiveDirector, getManager, inputPortList, newReceiver, outputPortList
isFireFunctional, isStrict, iterate, postfire, prefire, stop, stopFire, terminate
addInitializable, initialize, preinitialize, removeInitializable, wrapup
description, getContainer, getDisplayName, getFullName, getName, getName, setName
getDerivedLevel, getDerivedList, propagateValue
public PortParameter mean
public PortParameter covariance
public HMMGaussianClassifier(CompositeEntity container, java.lang.String name) throws NameDuplicationException, IllegalActionException
container
- The container.name
- The name of this actorIllegalActionException
- If the actor cannot be contained
by the proposed container.NameDuplicationException
- If the container already has an
actor with this name.public java.lang.Object clone(Workspace workspace) throws java.lang.CloneNotSupportedException
TypedAtomicActor
clone
in class ObservationClassifier
workspace
- The workspace for the new object.java.lang.CloneNotSupportedException
- If a derived class contains
an attribute that cannot be cloned.NamedObj.exportMoML(Writer, int, String)
,
NamedObj.setDeferringChangeRequests(boolean)
public void fire() throws IllegalActionException
fire
in interface Executable
fire
in class ObservationClassifier
IllegalActionException
- If a runtime type error occurs.protected double emissionProbability(double[] y, int hiddenState) throws IllegalActionException
ObservationClassifier
emissionProbability
in class ObservationClassifier
y
- The y valueshiddenState
- The hidden stateIllegalActionException
- If there is a problem calculating
the emission probability.